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1

Genome-wide analysis of genetic alterations in testicular primary seminoma using high resolution single nucleotide polymorphism arrays

Cynthia LeBron, Prodipto Pal, Mariana Brait, Santanu Dasgupta, Rafael Guerrero-Preston, Leendert H.J. Looijenga, Jeanne Kowalski, George Netto, Mohammad O. Hoque

Journal:

Year:

2011

Language:

english

File:

PDF, 1.10 MB

english, 2011

2

Quantitative detection of Merkel cell virus in human tissues and possible mode of transmission

Myriam Loyo, Rafael Guerrero-Preston, Mariana Brait, Mohmammad O. Hoque, Alice Chuang, Myoung S. Kim, Rajni Sharma, Nanette J. Liégeois, Wayne M. Koch, Joseph A. Califano, William H. Westra, David Sid

Journal:

International Journal of Cancer

Year:

2010

Language:

english

File:

PDF, 207 KB

english, 2010

3

KIF1A and EDNRB are differentially methylated in primary HNSCC and salivary rinses

Semra Demokan, Xiaofei Chang, Alice Chuang, Wojciech K. Mydlarz, Jatinder Kaur, Peng Huang, Zubair Khan, Tanbir Khan, Kimberly L. Ostrow, Mariana Brait, Mohammad O. Hoque, Nanette J. Liegeois, David S

Journal:

International Journal of Cancer

Year:

2010

Language:

english

File:

PDF, 488 KB

english, 2010

4

A survey of methylated candidate tumor suppressor genes in nasopharyngeal carcinoma

Myriam Loyo, Mariana Brait, Myoung S. Kim, Kimberly L. Ostrow, Chunfa C. Jie, Alice Y. Chuang, Joseph A. Califano, Nanette J. Liégeois, Shahnaz Begum, William H. Westra, Mohammad O. Hoque, Qian Tao, D

Journal:

International Journal of Cancer

Year:

2011

Language:

english

File:

PDF, 436 KB

english, 2011

5

Aberrant methylation in pediatric myelodysplastic syndrome

Daniel O. Vidal, Valéria A. Paixão, Mariana Brait, Elisabeth X. Souto, Otávia L. Caballero, Luiz Fernando Lopes, André L. Vettore

Journal:

Leukemia Research

Year:

2007

Language:

english

File:

PDF, 212 KB

english, 2007

6

AIM1 promoter hypermethylation as a predictor of decreased risk of recurrence following radical prostatectomy

Eli Rosenbaum, Shahnaz Begum, Mariana Brait, Marianna Zahurak, Leonel Maldonado, Leslie A. Mangold, Mario A. Eisenberger, Jonathan I. Epstein, Alan W. Partin, David Sidransky, Mohammad O. Hoque

Journal:

Year:

2012

Language:

english

File:

PDF, 126 KB

english, 2012

7

p16 gene methylation lacks correlation with angiogenesis and prognosis in multiple myeloma

Christian Ribas, Gisele W.B. Colleoni, Roberta Spetic Felix, Maria Regina Regis Silva, Otávia L. Caballero, Mariana Brait, José Orlando Bordin

Journal:

Year:

2005

Language:

english

File:

PDF, 225 KB

english, 2005

8

GSTP1 Promoter Methylation is Associated with Recurrence in Early Stage Prostate Cancer

Maldonado, Leonel, Brait, Mariana, Loyo, Myriam, Sullenberger, Lauren, Wang, Kevin, Peskoe, Sarah B., Rosenbaum, Eli, Howard, Roslyn, Toubaji, Antoun, Albadine, Roula, Netto, George J., Hoque, Mohamma

Journal:

The Journal of Urology

Year:

2014

Language:

english

File:

PDF, 208 KB

english, 2014

9

Tissue Inhibitor of Metalloproteinases-3 Promoter Methylation is an Independent Prognostic Factor for Bladder Cancer

Hoque, Mohammad Obaidul, Begum, Shahnaz, Brait, Mariana, Jeronimo, Carmen, Zahurak, Marianna, Ostrow, Kimberly Laskie, Rosenbaum, Eli, Trock, Bruce, Westra, William H., Schoenberg, Mark, Goodman, Stev

Journal:

The Journal of Urology

Year:

2008

Language:

english

File:

PDF, 210 KB

english, 2008

10

Cancer epigenetics: above and beyond

Brait, Mariana, Sidransky, David

Journal:

Toxicology Mechanisms and Methods

Year:

2011

Language:

english

File:

PDF, 962 KB

english, 2011

11

Genome-wide methylation profiling reveals Zinc finger protein 516 ( ZNF516 ) and FK-506-binding protein 6 ( FKBP6 ) promoters frequently methylated in cervical neoplasia, associated with HPV status and ethnicity in a Chilean population

Brebi, Priscilla, Maldonado, Leonel, Noordhuis, Maartje G, Ili, Carmen, Leal, Pamela, Garcia, Patricia, Brait, Mariana, Ribas, Judit, Michailidi, Christina, Perez, Jimena, Soudry, Ethan, Tapia, Oscar,

Journal:

Year:

2014

Language:

english

File:

PDF, 1.37 MB

english, 2014

12

Genome-wide methylation profiling and the PI3K-AKT pathway analysis associated with smoking in urothelial cell carcinoma

Brait, Mariana, Munari, Enrico, LeBron, Cynthia, Noordhuis, Maartje G., Begum, Shahnaz, Michailidi, Christina, Gonzalez-Roibon, Nilda, Maldonado, Leonel, Sen, Tanusree, Guerrero-Preston, Rafael, Cope,

Journal:

Year:

2013

Language:

english

File:

PDF, 1.63 MB

english, 2013

13

Global and gene-specific DNA methylation pattern discriminates cholecystitis from gallbladder cancer patients in Chile

Kagohara, Luciane Tsukamoto, Schussel, Juliana L, Subbannayya, Tejaswini, Sahasrabuddhe, Nandini, Lebron, Cynthia, Brait, Mariana, Maldonado, Leonel, Valle, Blanca L., Pirini, Francesca, Jahuira, Mart

Journal:

Future Oncology

Year:

2015

Language:

english

File:

PDF, 2.04 MB

english, 2015

14

Genome-Wide and Gene-Specific Epigenomic Platforms for Hepatocellular Carcinoma Biomarker Development Trials

Michailidi, Christina, Soudry, Ethan, Brait, Mariana, Maldonado, Leonel, Jaffe, Andrew, Ili-Gangas, Carmen, Brebi-Mieville, Priscilla, Perez, Jimena, Kim, Myoung Sook, Zhong, Xiaoli, Yang, Quiang, Val

Journal:

Gastroenterology Research and Practice

Year:

2014

Language:

english

File:

PDF, 1.03 MB

english, 2014

15

Milk derived colloid as a novel drug delivery carrier for breast cancer

Hayashi, Masamichi, Silanikove, Nissim, Chang, Xiaofei, Ravi, Rajani, Pham, Vui, Baia, Gilson, Paz, Keren, Brait, Mariana, Sidransky, David, Koch, Wayne M

Journal:

Cancer Biology & Therapy

Year:

2015

Language:

english

File:

PDF, 1.03 MB

english, 2015

16

Downregulation of insulin-like growth factor-binding protein 7 in cisplatin-resistant non-small cell lung cancer

Okamura, Jun, Huang, Yiping, Moon, David, Brait, Mariana, Chang, Xiaofei, Sook-Kim, Myoung

Journal:

Cancer Biology & Therapy

Year:

2012

Language:

english

File:

PDF, 2.23 MB

english, 2012

17

Correlation between BRAF mutation and promoter methylation of TIMP3, RARβ2 and RASSF1A in thyroid cancer

Brait, Mariana, Loyo, Myriam, Rosenbaum, Eli, Ostrow, Kimberly L., Markova, Alina, Papagerakis, Silvana, Zahurak, Marianna, Goodman, Steven M., Zeiger, Martha, Sidransky, David, Umbricht, Christopher

Journal:

Year:

2012

Language:

english

File:

PDF, 1.02 MB

english, 2012

18

Targeted sequencing reveals clonal genetic changes in the progression of early lung neoplasms and paired circulating DNA

Izumchenko, Evgeny, Chang, Xiaofei, Brait, Mariana, Fertig, Elana, Kagohara, Luciane T., Bedi, Atul, Marchionni, Luigi, Agrawal, Nishant, Ravi, Rajani, Jones, Sian, Hoque, Mohammad O., Westra, William

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 1.07 MB

english, 2015

19

Detection of Serum Deoxyribonucleic Acid Methylation Markers: A Novel Diagnostic Tool for Thyroid Cancer

Hu, Shuiying, Ewertz, Marge, Tufano, Ralph P., Brait, Mariana, Carvalho, Andre Lopes, Liu, Dingxie, Tufaro, Anthony P., Basaria, Shehzad, Cooper, David S., Sidransky, David, Ladenson, Paul W., Xing, M

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2006

Language:

english

File:

PDF, 401 KB

english, 2006

20

Epigenetic screening of salivary gland mucoepidermoid carcinoma identifies hypomethylation of CLIC3 as a common alteration

Wang, Zhiming, Ling, Shizhang, Rettig, Eleni, Sobel, Ryan, Tan, Marietta, Fertig, Elana J., Considine, Michael, El-Naggar, Adel K., Brait, Mariana, Fakhry, Carole, Ha, Patrick K.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.13 MB

english, 2015

21

High-performance detection of somatic D-loop mutation in urothelial cell carcinoma patients by polymorphism ratio sequencing

Duberow, David P., Brait, Mariana, Hoque, Mohammad O., Theodorescu, Dan, Sidransky, David, Dasgupta, Santanu, Mathies, Richard A.

Journal:

Journal of Molecular Medicine

Year:

2016

Language:

english

File:

PDF, 1.04 MB

english, 2016

22

An integrated genome-wide approach to discover deregulated microRNAs in non-small cell lung cancer: Clinical significance of miR-23b-3p deregulation

Begum, Shahnaz, Hayashi, Masamichi, Ogawa, Takenori, Jabboure, Fayez J., Brait, Mariana, Izumchenko, Evgeny, Tabak, Sarit, Ahrendt, Steven A., Westra, William H., Koch, Wayne, Sidransky, David, Hoque,

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 1.79 MB

english, 2015

23

Genetic and Epigenetic Analysis of erbB Signaling Pathway Genes in Lung Cancer

Hoque, Mohammad Obaidul, Brait, Mariana, Rosenbaum, Eli, Poeta, Maria Luana, Pal, Prodipto, Begum, Shahnaz, Dasgupta, Santanu, Carvalho, Andre L., Ahrendt, Steven A., Westra, William H., Sidransky, Da

Journal:

Journal of Thoracic Oncology

Year:

2010

Language:

english

File:

PDF, 291 KB

english, 2010

24

Comparative mutational landscape analysis of patient-derived tumour xenografts

Brait, Mariana, Izumchenko, Evgeny, Kagohara, Luciane T, Long, Samuel, Wysocki, Piotr T, Faherty, Brian, Fertig, Elana J, Khor, Tin Oo, Bruckheimer, Elizabeth, Baia, Gilson, Ciznadija, Daniel, Sloma,

Journal:

British Journal of Cancer

Year:

2017

Language:

english

File:

PDF, 1.73 MB

english, 2017

25

Expression of GULP1 in bronchial epithelium is associated with the progression of emphysema in chronic obstructive pulmonary disease

Datta, Sayantan, Nam, Hae-Seong, Hayashi, Masamichi, Maldonado, Leonel, Goldberg, Rachel, Brait, Mariana, Sidransky, David, Illei, Peter, Baras, Alex, Vij, Neeraj, Hoque, Mohammad O.

Journal:

Respiratory Medicine

Year:

2017

Language:

english

File:

PDF, 892 KB

english, 2017

26

A panel of novel detection and prognostic methylated DNA markers in primary non-small cell lung cancer and serum DNA

Ooki, Akira, Maleki, Zahra, Tsay, Jun-Chieh J, Goparaju, Chandra M, Brait, Mariana, Turaga, Nitesh, Nam, Hae-Seong, Rom, William, Pass, Harvey, Sidransky, David, Guerrero-Preston, Rafael, Hoque, Moham

Journal:

Clinical Cancer Research

Year:

2017

Language:

english

File:

PDF, 1.69 MB

english, 2017

27

Advancing toward a molecular characterization of polymorphous low grade adenocarcinoma

Wysocki, Piotr T., Westra, William H., Sidransky, David, Brait, Mariana

Journal:

Year:

2017

Language:

english

File:

PDF, 198 KB

english, 2017

28

Tobacco and alcohol-induced epigenetic changes in oral carcinoma

Ghantous, Yasmine, Schussel, Juliana L., Brait, Mariana

Journal:

Current Opinion in Oncology

Year:

2018

Language:

english

File:

PDF, 418 KB

english, 2018

29

Cysteine Dioxygenase 1 Is a Tumor Suppressor Gene Silenced by Promoter Methylation in Multiple Human Cancers

Brait, Mariana, Ling, Shizhang, Nagpal, Jatin K., Chang, Xiaofei, Park, Hannah Lui, Lee, Juna, Okamura, Jun, Yamashita, Keishi, Sidransky, David, Kim, Myoung Sook, Wong, Chun-Ming

Journal:

Year:

2012

Language:

english

File:

PDF, 1.32 MB

english, 2012

30

Expression Microarray Analysis Reveals Alternative Splicing of LAMA3 and DST Genes in Head and Neck Squamous Cell Carcinoma

Li, Ryan, Ochs, Michael F., Ahn, Sun Mi, Hennessey, Patrick, Tan, Marietta, Soudry, Ethan, Gaykalova, Daria A., Uemura, Mamoru, Brait, Mariana, Shao, Chunbo, Westra, William, Bishop, Justin, Fertig, E

Journal:

Year:

2014

Language:

english

File:

PDF, 997 KB

english, 2014

31

Integrated Transcriptomic and Epigenomic Analysis of Ovarian Cancer Reveals Epigenetically Silenced GULP1

Maldonado, Leonel, Brait, Mariana, Izumchenko, Evgeny, Begum, Shahnaz, Chatterjee, Aditi, Sen, Tanusree, Loyo, Myriam, Barbosa, Alvaro, Poeta, Maria Luana, Makarev, Eugene, Zhavoronkov, Alex, Fazio, V

Journal:

Year:

2018

Language:

english

File:

PDF, 4.02 MB

english, 2018

32

Aberrant Promoter Methylation Can be Useful as a Marker of Recurrent Disease in Patients with Cervical Intraepithelial Neoplasia Grade III

Terra, Ana Paula Sarreta, Murta, Eddie Fernando Candido, Maluf, Paulo José, Caballero, Otávia Luísa Silva Damas, Brait, Mariana, Adad, Sheila Jorge

Journal:

Year:

2007

Language:

english

File:

PDF, 171 KB

english, 2007

33

Identification of methylated genes in salivary gland adenoid cystic carcinoma xenografts using global demethylation and methylation microarray screening

LING, SHIZHANG, RETTIG, ELENI M., TAN, MARIETTA, CHANG, XIAOFEI, WANG, ZHIMING, BRAIT, MARIANA, BISHOP, JUSTIN A., FERTIG, ELANA J., CONSIDINE, MICHAEL, WICK, MICHAEL J., HA, PATRICK K.

Journal:

International Journal of Oncology

Year:

2016

Language:

english

File:

PDF, 496 KB

english, 2016

34

Adenoid cystic carcinoma: emerging role of translocations and gene fusions

Wysocki, Piotr T., Izumchenko, Evgeny, Meir, Juliet, Ha, Patrick K., Sidransky, David, Brait, Mariana

Journal:

Year:

2016

Language:

english

File:

PDF, 1.55 MB

english, 2016

35

Tissue and Cell-Free DNA-Based Epigenomic Approaches for Cancer Detection

Leal, Alessandro, Sidransky, David, Brait, Mariana

Journal:

Clinical Chemistry

Year:

2019

File:

PDF, 167 KB

2019